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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACWI_09370ABC-2 family transporter protein. (388 aa)    
Predicted Functional Partners:
drrA_1
Daunorubicin/doxorubicin resistance ATP-binding protein DrrA.
 
 
 0.974
ACWI_09360
ABC-2 family transporter protein.
 
     0.962
desK
Sensor histidine kinase DesK.
 
  
 0.925
vraR
Response regulator protein VraR.
 
   
 0.874
yxlF_3
Putative ABC transporter ATP-binding protein YxlF.
 
 
 0.678
ecsA_2
ABC-type transporter ATP-binding protein EcsA.
 
 
 0.674
rutE
Malonic semialdehyde reductase RutE.
 
  
 0.672
ybhF_2
Putative ABC transporter ATP-binding protein YbhF.
 
 
 0.633
albA_1
Albonoursin synthase.
  
  
 0.621
ACWI_16820
Putative NAD(P)H nitroreductase.
  
  
 0.621
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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