STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACWI_09660Hypothetical protein; SNF2 family N-terminal domain. (2294 aa)    
Predicted Functional Partners:
ACWI_09640
Hypothetical protein.
 
     0.976
dnaG_2
DNA primase.
   
 0.806
ACWI_10280
Relaxase/mobilization nuclease domain protein.
 
     0.779
traG
Conjugal transfer protein TraG.
 
     0.734
ACWI_02340
Hypothetical protein.
 
     0.703
ACWI_09690
Hypothetical protein.
 
   
 0.685
aplIM
Modification methylase AplI.
    
 0.677
dcm
DNA-cytosine methyltransferase.
    
 0.677
parB
Chromosome-partitioning protein ParB.
 
     0.659
noc
Nucleoid occlusion protein.
 
     0.618
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.