STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mepM_2Murein DD-endopeptidase MepM. (352 aa)    
Predicted Functional Partners:
fliN
Flagellar motor switch protein FliN.
   
 
 0.819
ACWI_09820
Hypothetical protein.
     
 0.796
ACWI_09810
AAA-like domain protein.
       0.787
pbpF
Penicillin-binding protein 1F.
  
   
 0.674
ACWI_09790
Hypothetical protein.
       0.648
ACWI_09780
Hypothetical protein.
     
 0.644
ACWI_09760
Hypothetical protein.
       0.635
ACWI_09770
Hypothetical protein.
       0.635
fliM
Flagellar motor switch protein FliM.
    
 
 0.559
mraY
phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.
 
 
 0.524
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.