STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACWI_10190Hypothetical protein. (190 aa)    
Predicted Functional Partners:
ACWI_10200
Hypothetical protein.
       0.773
pksJ
Polyketide synthase PksJ.
     
 0.721
lgrD
Linear gramicidin synthase subunit D; Belongs to the ATP-dependent AMP-binding enzyme family.
     
 0.704
ACWI_18220
Ferredoxin.
  
 
 0.703
ACWI_18020
Rubredoxin.
  
  
 0.576
ssbA_1
Single-stranded DNA-binding protein A; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.
       0.572
ACWI_30750
Hypothetical protein.
  
 
 0.550
yhhW
Quercetin 2,3-dioxygenase; Belongs to the pirin family.
  
  
 0.511
ACWI_09660
Hypothetical protein; SNF2 family N-terminal domain.
     
 0.495
ACWI_06620
Putative thiamine biosynthesis protein.
  
  
 0.493
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.