STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
soj_1Sporulation initiation inhibitor protein Soj. (275 aa)    
Predicted Functional Partners:
spo0C_1
Chromosome-partitioning protein Spo0J; Belongs to the ParB family.
 
 0.986
noc
Nucleoid occlusion protein.
 
 
 0.956
spo0C_2
Chromosome-partitioning protein Spo0J; Belongs to the ParB family.
 
 
 0.934
parB
Chromosome-partitioning protein ParB.
 
 
 0.829
ACWI_10380
Hypothetical protein.
       0.773
ACWI_10390
Hypothetical protein.
       0.773
ACWI_30190
Hypothetical protein.
  
 
 0.733
dpnA
Modification methylase DpnIIB.
  
 
 0.733
dnaA_1
Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.
 
 
 
 0.697
ACWI_00450
Beta-monoglucosyldiacylglycerol synthase.
  
 
 0.685
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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