STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ywnAPutative HTH-type transcriptional regulator YwnA. (126 aa)    
Predicted Functional Partners:
cymR_3
HTH-type transcriptional regulator CymR.
  
     0.717
iscS_1
Cysteine desulfurase IscS.
  
 
 0.712
iscS_2
Cysteine desulfurase IscS; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily.
  
 
 0.712
iscS_3
Cysteine desulfurase IscS.
  
 
 0.712
iscS_4
Cysteine desulfurase IscS.
  
 
 0.712
ubiE_1
Demethylmenaquinone methyltransferase.
 
 
   0.658
fliG
Flagellar motor switch protein FliG.
    
 
 0.588
iscU_1
Iron-sulfur cluster assembly scaffold protein IscU.
  
  
 0.503
iscU_2
Iron-sulfur cluster assembly scaffold protein IscU.
  
  
 0.503
ACWI_31780
Dinitrogenase iron-molybdenum cofactor.
  
  
 0.503
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.