STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nylB6-aminohexanoate-dimer hydrolase. (327 aa)    
Predicted Functional Partners:
pksJ
Polyketide synthase PksJ.
  
  
 0.688
rutD_2
Putative aminoacrylate hydrolase RutD.
  
  
 0.688
guaA_1
GMP synthase; Catalyzes the synthesis of GMP from XMP.
     
 0.609
bglB
Thermostable beta-glucosidase B; Belongs to the glycosyl hydrolase 3 family.
  
 
 0.596
ACWI_10670
Hypothetical protein.
     
 0.590
ACWI_13750
Alpha/beta hydrolase family protein.
  
  
 0.580
tetD_1
Transposon Tn10 TetD protein.
  
     0.557
ACWI_28770
DNA-binding transcriptional regulator AraC.
  
   
 0.527
ACWI_02320
HTH domain protein.
  
     0.524
lgrD
Linear gramicidin synthase subunit D; Belongs to the ATP-dependent AMP-binding enzyme family.
  
  
 0.497
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.