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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ywqE_2Tyrosine-protein phosphatase YwqE. (268 aa)    
Predicted Functional Partners:
cap8A_1
Capsular polysaccharide type 8 biosynthesis protein cap8A.
 
 
 0.972
ywqD_2
Tyrosine-protein kinase YwqD.
  
 0.940
ywqD_1
Tyrosine-protein kinase YwqD.
  
 0.925
cap8A_2
Capsular polysaccharide type 8 biosynthesis protein cap8A.
 
 
 0.914
pglF_2
UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase.
  
  
 0.777
wcaJ_1
UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase.
  
  
 0.732
rsbT
Serine/threonine-protein kinase RsbT.
    
   0.668
ACWI_14730
Hypothetical protein.
    
   0.536
rsbW
Serine-protein kinase RsbW.
    
   0.536
ACWI_12440
Transposase DDE domain protein.
       0.482
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.