STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACWI_12970Hypothetical protein. (248 aa)    
Predicted Functional Partners:
ctpF_1
Putative cation-transporting ATPase F.
    
 
 0.603
ACWI_19970
Calcium-transporting ATPase 1.
    
 
 0.603
ACWI_20240
Calcium-transporting ATPase 1.
    
 
 0.603
ctpF_2
Putative cation-transporting ATPase F.
    
 
 0.603
yliE
Putative cyclic di-GMP phosphodiesterase YliE.
  
    0.430
ACWI_20380
Peptidase family S41.
  
     0.418
nikE
Nickel import ATP-binding protein NikE.
       0.417
gsiA
Glutathione import ATP-binding protein GsiA.
       0.417
gsiD_1
Glutathione transport system permease protein GsiD.
       0.417
nikB_1
Nickel transport system permease protein NikB.
       0.417
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.