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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ywqNPutative NAD(P)H-dependent FMN-containing oxidoreductase YwqN. (188 aa)    
Predicted Functional Partners:
ACWI_28510
Iron-sulfur flavoprotein.
  
     0.742
trxA_2
Thioredoxin-1; Belongs to the thioredoxin family.
     
 0.690
ACWI_30760
NADPH-dependent FMN reductase.
  
     0.607
ACWI_16820
Putative NAD(P)H nitroreductase.
 
  
 0.455
fprA
Nitric oxide reductase.
 
 
  0.445
ACWI_24810
TSCPD domain protein.
  
     0.440
norV
Anaerobic nitric oxide reductase flavorubredoxin.
 
 
  0.429
ACWI_13520
Hypothetical protein.
       0.425
ndhI_1
NAD(P)H-quinone oxidoreductase subunit I, chloroplastic.
  
     0.411
albA_1
Albonoursin synthase.
  
  
 0.407
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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