STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACWI_13670Clostridial hydrophobic W. (706 aa)    
Predicted Functional Partners:
ACWI_03590
Phage head-tail joining protein.
  
 
 0.702
ACWI_31280
Phage head-tail joining protein.
  
 
 0.702
ACWI_33740
Phage head-tail joining protein.
  
 
 0.702
ACWI_03550
Phage portal protein.
  
 
 0.697
ACWI_31320
Phage portal protein.
  
 
 0.697
ACWI_33080
Phage portal protein.
  
 
 0.697
ACWI_33790
Phage portal protein.
  
 
 0.697
ACWI_33660
Prophage endopeptidase tail.
  
   0.655
ACWI_32900
Hypothetical protein.
   
   0.652
ACWI_03570
Phage capsid family protein.
  
 
 0.639
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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