STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACWI_13680Transcriptional regulator PadR-like family protein. (179 aa)    
Predicted Functional Partners:
ACWI_13700
ABC-2 type transporter.
 
     0.862
ACWI_13690
Fluoroquinolones export ATP-binding proteinc.
 
    0.819
ydeA
Putative protease YdeA.
  
     0.550
ACWI_13670
Clostridial hydrophobic W.
     
 0.455
ACWI_13860
Pentapeptide repeats (8 copies).
 
     0.432
cdr_4
Coenzyme A disulfide reductase; Belongs to the sulfur carrier protein TusA family.
  
  
 0.404
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.