STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACWI_13700ABC-2 type transporter. (239 aa)    
Predicted Functional Partners:
ACWI_13690
Fluoroquinolones export ATP-binding proteinc.
 
 
 0.967
ACWI_13680
Transcriptional regulator PadR-like family protein.
 
     0.866
tagG
Teichoic acid translocation permease protein TagG.
    
  0.611
pksJ
Polyketide synthase PksJ.
  
  
 0.605
yxlF_2
Putative ABC transporter ATP-binding protein YxlF.
 
 
 0.583
ybhF_3
Putative ABC transporter ATP-binding protein YbhF.
 
 
 0.580
ACWI_16820
Putative NAD(P)H nitroreductase.
 
  
 0.558
ACWI_20200
CAAX amino terminal protease self- immunity.
   
  
 0.525
yxlF_1
Putative ABC transporter ATP-binding protein YxlF.
  
 
 0.514
ecsA_1
ABC-type transporter ATP-binding protein EcsA.
  
 
 0.514
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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