STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yehTTranscriptional regulatory protein YehT. (373 aa)    
Predicted Functional Partners:
ypdA_1
Sensor histidine kinase YpdA.
 
     0.904
lytR_3
Sensory transduction protein LytR.
  
     0.678
prkC_1
Serine/threonine-protein kinase PrkC.
       0.648
ypdA_2
Sensor histidine kinase YpdA.
  
     0.639
ACWI_14530
Hypothetical protein.
       0.634
regX3_1
Sensory transduction protein regX3.
  
   
 0.491
ycdT_1
Putative diguanylate cyclase YcdT.
       0.473
srrA_2
Transcriptional regulatory protein SrrA.
  
   
 0.426
yycF_1
Transcriptional regulatory protein YycF.
  
   
 0.421
walR_1
Transcriptional regulatory protein WalR.
  
   
 0.421
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.