STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ppdK_2Pyruvate, phosphate dikinase. (1362 aa)    
Predicted Functional Partners:
yqfL
Putative pyruvate, phosphate dikinase regulatory protein; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation/dephosphorylation.
 
  
 0.718
nifJ
Pyruvate-flavodoxin oxidoreductase.
     
 0.700
pksJ
Polyketide synthase PksJ.
  
  
 0.700
gcvT_1
Aminomethyltransferase.
   
  
 0.505
gltB_1
Ferredoxin-dependent glutamate synthase 1.
  
  
 0.476
metG
methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
     
 0.452
pyk
Pyruvate kinase; Belongs to the pyruvate kinase family.
     
 0.443
yecS_2
Inner membrane amino-acid ABC transporter permease protein YecS.
       0.439
glnQ_2
Glutamine transport ATP-binding protein GlnQ.
       0.439
dfx_1
Desulfoferrodoxin.
       0.434
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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