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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lagDlactococcin-G-processing and transport ATP-binding protein LagD. (733 aa)    
Predicted Functional Partners:
ACWI_01570
Macrolide transporter subunit MacA.
  
 0.956
pstB3
Phosphate import ATP-binding protein PstB 3; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
     
0.901
yxdL_1
ABC transporter ATP-binding protein YxdL.
 
     
0.877
hlyB
Alpha-hemolysin translocation ATP-binding protein HlyB.
 
    
0.835
ACWI_14490
Putative ABC transporter ATP-binding protein.
 
 
0.823
ACWI_24480
Putative ABC transporter ATP-binding protein.
 
 
0.820
ACWI_24490
Putative multidrug export ATP-binding/permease protein.
 
 
0.820
ACWI_14480
Putative ABC transporter ATP-binding protein.
 
 
0.819
ACWI_25470
Putative ABC transporter ATP-binding protein.
 
 
0.819
ACWI_15790
Putative ABC transporter ATP-binding protein.
 
 
0.817
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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