Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
pucDPutative xanthine dehydrogenase subunit D. (759 aa)    
Predicted Functional Partners:
ndhS
Nicotinate dehydrogenase small FeS subunit.
 
 0.999
ndhF
Nicotinate dehydrogenase FAD-subunit.
 
 0.998
cutS
Carbon monoxide dehydrogenase small chain.
 
 0.997
cutM
Carbon monoxide dehydrogenase medium chain.
 
 0.997
mop
Aldehyde oxidoreductase.
 
 
0.881
pucA_1
Putative xanthine dehydrogenase subunit A.
 
  
 0.853
pucA_2
Putative xanthine dehydrogenase subunit A.
 
  
 0.838
pucA_3
Putative xanthine dehydrogenase subunit A.
 
  
 0.838
cuyA
L-cysteate sulfo-lyase.
       0.671
mocA_2
Molybdenum cofactor cytidylyltransferase.
 
   
 0.641
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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