STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ycnEPutative monooxygenase YcnE. (103 aa)    
Predicted Functional Partners:
lsrF
Putative aldolase LsrF.
  
  
 0.634
polA_1
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
   
    0.480
ACWI_14430
Carboxymuconolactone decarboxylase family protein.
  
 
  0.462
ACWI_28840
Carboxymuconolactone decarboxylase family protein.
  
 
  0.462
msrB
Peptide methionine sulfoxide reductase MsrB.
 
     0.453
ACWI_29030
Major facilitator superfamily protein.
  
     0.433
ngr
Nigerythrin.
       0.420
barA_1
Signal transduction histidine-protein kinase BarA.
  
  
 0.413
ACWI_29670
Major facilitator superfamily protein.
  
   
 0.413
ACWI_11490
Hypothetical protein.
  
     0.407
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.