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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACWI_15360Acetoacetate decarboxylase (ADC). (218 aa)    
Predicted Functional Partners:
ACWI_15370
Putative oxidoreductase.
 
     0.816
ACWI_15380
Hypothetical protein.
       0.773
atoD
Acetate CoA-transferase subunit alpha.
    
 0.650
ctfB
Butyrate--acetoacetate CoA-transferase subunit B.
    
 0.610
adrA_3
Putative diguanylate cyclase AdrA.
       0.548
ydiF
Acetate CoA-transferase YdiF; Belongs to the 3-oxoacid CoA-transferase family.
     
 0.535
gutB
Sorbitol dehydrogenase.
    
 0.508
gatD
Galactitol-1-phosphate 5-dehydrogenase.
    
 0.508
prkC_1
Serine/threonine-protein kinase PrkC.
  
     0.471
ACWI_15390
Ca(2+)/H(+) antiporter; Ca(+)/H(+) antiporter that extrudes calcium in exchange for external protons.
       0.464
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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