Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ACWI_15420 | pbpE | ACWI_15420 | ACWI_15400 | Hypothetical protein. | Penicillin-binding protein 4; Belongs to the class-A beta-lactamase family. | 0.454 |
| ACWI_15420 | pbpX_2 | ACWI_15420 | ACWI_15410 | Hypothetical protein. | Putative penicillin-binding protein PbpX. | 0.550 |
| bglB | nylB | ACWI_28120 | ACWI_10660 | Thermostable beta-glucosidase B; Belongs to the glycosyl hydrolase 3 family. | 6-aminohexanoate-dimer hydrolase. | 0.596 |
| bglB | pbpE | ACWI_28120 | ACWI_15400 | Thermostable beta-glucosidase B; Belongs to the glycosyl hydrolase 3 family. | Penicillin-binding protein 4; Belongs to the class-A beta-lactamase family. | 0.642 |
| bglB | pbpX_2 | ACWI_28120 | ACWI_15410 | Thermostable beta-glucosidase B; Belongs to the glycosyl hydrolase 3 family. | Putative penicillin-binding protein PbpX. | 0.596 |
| bglB | pksJ | ACWI_28120 | ACWI_26840 | Thermostable beta-glucosidase B; Belongs to the glycosyl hydrolase 3 family. | Polyketide synthase PksJ. | 0.474 |
| dacB | guaA_1 | ACWI_35300 | ACWI_01040 | D-alanyl-D-alanine carboxypeptidase DacB precursor; Belongs to the peptidase S11 family. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.504 |
| dacB | nylB | ACWI_35300 | ACWI_10660 | D-alanyl-D-alanine carboxypeptidase DacB precursor; Belongs to the peptidase S11 family. | 6-aminohexanoate-dimer hydrolase. | 0.467 |
| dacB | pbpE | ACWI_35300 | ACWI_15400 | D-alanyl-D-alanine carboxypeptidase DacB precursor; Belongs to the peptidase S11 family. | Penicillin-binding protein 4; Belongs to the class-A beta-lactamase family. | 0.467 |
| dacB | pbpX_2 | ACWI_35300 | ACWI_15410 | D-alanyl-D-alanine carboxypeptidase DacB precursor; Belongs to the peptidase S11 family. | Putative penicillin-binding protein PbpX. | 0.467 |
| glgP | pbpE | ACWI_03060 | ACWI_15400 | Glycogen phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. | Penicillin-binding protein 4; Belongs to the class-A beta-lactamase family. | 0.461 |
| glgP | pbpX_2 | ACWI_03060 | ACWI_15410 | Glycogen phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. | Putative penicillin-binding protein PbpX. | 0.461 |
| glgP | pksJ | ACWI_03060 | ACWI_26840 | Glycogen phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. | Polyketide synthase PksJ. | 0.656 |
| guaA_1 | dacB | ACWI_01040 | ACWI_35300 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | D-alanyl-D-alanine carboxypeptidase DacB precursor; Belongs to the peptidase S11 family. | 0.504 |
| guaA_1 | nylB | ACWI_01040 | ACWI_10660 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 6-aminohexanoate-dimer hydrolase. | 0.609 |
| guaA_1 | pbpE | ACWI_01040 | ACWI_15400 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | Penicillin-binding protein 4; Belongs to the class-A beta-lactamase family. | 0.609 |
| guaA_1 | pbpX_2 | ACWI_01040 | ACWI_15410 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | Putative penicillin-binding protein PbpX. | 0.609 |
| guaA_1 | pksJ | ACWI_01040 | ACWI_26840 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | Polyketide synthase PksJ. | 0.842 |
| lgrD | nylB | ACWI_30370 | ACWI_10660 | Linear gramicidin synthase subunit D; Belongs to the ATP-dependent AMP-binding enzyme family. | 6-aminohexanoate-dimer hydrolase. | 0.497 |
| lgrD | patA | ACWI_30370 | ACWI_07370 | Linear gramicidin synthase subunit D; Belongs to the ATP-dependent AMP-binding enzyme family. | Peptidoglycan O-acetyltransferase; Belongs to the membrane-bound acyltransferase family. | 0.748 |
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