Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
btrHTH-type transcriptional activator Btr. (289 aa)    
Predicted Functional Partners:
ACWI_15490
EamA-like transporter family protein.
  
 0.946
ACWI_28770
DNA-binding transcriptional regulator AraC.
 
 
 0.744
rob
Right origin-binding protein.
  
     0.656
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.642
chbR
HTH-type transcriptional regulator ChbR.
  
     0.598
tetD_1
Transposon Tn10 TetD protein.
  
   
 0.573
marA
Multiple antibiotic resistance protein MarA.
  
   
 0.570
fdhD_2
Protein FdhD; Required for formate dehydrogenase (FDH) activity. Belongs to the FdhD family.
       0.542
cdaR_1
Carbohydrate diacid regulator.
  
    0.501
ACWI_02720
HTH domain protein.
  
     0.491
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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