STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ureGUrease accessory protein UreG. (229 aa)    
Predicted Functional Partners:
macB_3
Macrolide export ATP-binding/permease protein MacB.
  
 0.996
ACWI_15550
Hypothetical protein.
 
     0.886
ACWI_15530
NTPase.
 
     0.822
hydA
Periplasmic [Fe] hydrogenase large subunit.
  
    0.812
rsmC
Ribosomal RNA small subunit methyltransferase C.
       0.779
yfmC
Fe(3+)-citrate-binding protein YfmC precursor.
 
     0.730
ACWI_15590
Putative ABC transporter ATP-binding protein.
 
   
 0.572
nifJ
Pyruvate-flavodoxin oxidoreductase.
     
 0.505
nikA
Nickel-binding periplasmic protein precursor.
     
 0.446
sfrB_1
NADPH-Fe(3+) oxidoreductase subunit beta.
 
  
 0.411
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.