Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACWI_16100Hypothetical protein. (239 aa)    
Predicted Functional Partners:
tap_10
Methyl-accepting chemotaxis protein IV.
       0.773
ACWI_29150
Methylcobalamin:coenzyme M methyltransferase; Belongs to the uroporphyrinogen decarboxylase family.
  
     0.773
ACWI_11070
Hypothetical protein.
 
     0.765
ACWI_01220
Hypothetical protein.
 
     0.761
ACWI_14190
Hypothetical protein.
  
     0.754
ACWI_35410
Hypothetical protein.
 
     0.752
ACWI_27130
Hypothetical protein.
  
     0.748
yvoA_2
HTH-type transcriptional repressor YvoA.
  
     0.739
nasF
uroporphyrinogen-III C-methyltransferase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.
  
 
 0.725
ACWI_29110
Hypothetical protein.
  
     0.687
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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