Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
nqrF_1Na(+)-translocating NADH-quinone reductase subunit F. (605 aa)    
Predicted Functional Partners:
acsD
Corrinoid/iron-sulfur protein small subunit.
 
 
 
 0.837
acsC
Corrinoid/iron-sulfur protein large subunit.
 
 
 0.837
ACWI_16370
Trimethylamine methyltransferase MttB.
 
     0.759
ACWI_16330
Trimethylamine methyltransferase MttB.
 
     0.747
ACWI_16340
Trimethylamine methyltransferase MttB.
 
     0.738
ACWI_08970
Trimethylamine methyltransferase (MTTB); Belongs to the trimethylamine methyltransferase family.
 
     0.726
ACWI_35400
Trimethylamine methyltransferase (MTTB).
 
     0.700
ACWI_16460
Vitamin B12 dependent methionine synthase, activation domain.
  
 
 0.679
ACWI_35450
Trimethylamine methyltransferase (MTTB).
 
     0.660
hemE_3
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
 
  
 0.655
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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