Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACWI_16820 | bcrC | ACWI_16820 | ACWI_05500 | Putative NAD(P)H nitroreductase. | Undecaprenyl-diphosphatase BcrC. | 0.410 |
ACWI_16820 | ecfA1_2 | ACWI_16820 | ACWI_16830 | Putative NAD(P)H nitroreductase. | Energy-coupling factor transporter ATP-binding protein EcfA1. | 0.631 |
ACWI_16820 | fetB | ACWI_16820 | ACWI_16840 | Putative NAD(P)H nitroreductase. | Putative iron export permease protein FetB. | 0.631 |
ACWI_16820 | pksJ | ACWI_16820 | ACWI_26840 | Putative NAD(P)H nitroreductase. | Polyketide synthase PksJ. | 0.990 |
ACWI_16820 | uppP | ACWI_16820 | ACWI_16810 | Putative NAD(P)H nitroreductase. | Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. | 0.644 |
bcrC | ACWI_16820 | ACWI_05500 | ACWI_16820 | Undecaprenyl-diphosphatase BcrC. | Putative NAD(P)H nitroreductase. | 0.410 |
bcrC | dgkA | ACWI_05500 | ACWI_29710 | Undecaprenyl-diphosphatase BcrC. | Undecaprenol kinase. | 0.644 |
bcrC | mraY | ACWI_05500 | ACWI_17780 | Undecaprenyl-diphosphatase BcrC. | phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily. | 0.639 |
bcrC | pksJ | ACWI_05500 | ACWI_26840 | Undecaprenyl-diphosphatase BcrC. | Polyketide synthase PksJ. | 0.991 |
bcrC | uppP | ACWI_05500 | ACWI_16810 | Undecaprenyl-diphosphatase BcrC. | Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. | 0.665 |
bcrC | uppS | ACWI_05500 | ACWI_25960 | Undecaprenyl-diphosphatase BcrC. | Isoprenyl transferase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. | 0.652 |
dgkA | bcrC | ACWI_29710 | ACWI_05500 | Undecaprenol kinase. | Undecaprenyl-diphosphatase BcrC. | 0.644 |
dgkA | mraY | ACWI_29710 | ACWI_17780 | Undecaprenol kinase. | phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily. | 0.740 |
dgkA | pksJ | ACWI_29710 | ACWI_26840 | Undecaprenol kinase. | Polyketide synthase PksJ. | 0.833 |
dgkA | uppP | ACWI_29710 | ACWI_16810 | Undecaprenol kinase. | Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. | 0.773 |
ecfA1_2 | ACWI_16820 | ACWI_16830 | ACWI_16820 | Energy-coupling factor transporter ATP-binding protein EcfA1. | Putative NAD(P)H nitroreductase. | 0.631 |
ecfA1_2 | fetB | ACWI_16830 | ACWI_16840 | Energy-coupling factor transporter ATP-binding protein EcfA1. | Putative iron export permease protein FetB. | 0.941 |
ecfA1_2 | uppP | ACWI_16830 | ACWI_16810 | Energy-coupling factor transporter ATP-binding protein EcfA1. | Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. | 0.538 |
fetB | ACWI_16820 | ACWI_16840 | ACWI_16820 | Putative iron export permease protein FetB. | Putative NAD(P)H nitroreductase. | 0.631 |
fetB | ecfA1_2 | ACWI_16840 | ACWI_16830 | Putative iron export permease protein FetB. | Energy-coupling factor transporter ATP-binding protein EcfA1. | 0.941 |
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