Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
dhaT1,3-propanediol dehydrogenase. (411 aa)    
Predicted Functional Partners:
sucD
Succinate-semialdehyde dehydrogenase (acetylating).
 
 0.952
ACWI_17100
Hypothetical protein.
       0.773
ydhV_2
Putative oxidoreductase YdhV.
  
  
 0.679
ndhI_2
NAD(P)H-quinone oxidoreductase subunit I, chloroplastic.
     
 0.669
ctfB
Butyrate--acetoacetate CoA-transferase subunit B.
 
  
 0.617
atoD
Acetate CoA-transferase subunit alpha.
 
  
 0.570
nifJ
Pyruvate-flavodoxin oxidoreductase.
  
  
 0.494
glgA
Glycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
   
    0.489
korA
2-oxoglutarate oxidoreductase subunit KorA.
  
  
 0.466
pflA_1
Pyruvate formate-lyase 1-activating enzyme.
  
  
 0.435
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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