STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dhaT1,3-propanediol dehydrogenase. (411 aa)    
Predicted Functional Partners:
sucD
Succinate-semialdehyde dehydrogenase (acetylating).
 0.974
nifJ
Pyruvate-flavodoxin oxidoreductase.
  
 
 0.870
ACWI_17100
Hypothetical protein.
       0.773
sfrB_1
NADPH-Fe(3+) oxidoreductase subunit beta.
    
 0.771
sfrB_2
NADPH-Fe(3+) oxidoreductase subunit beta.
    
 0.771
ctfB
Butyrate--acetoacetate CoA-transferase subunit B.
 
 
 0.747
korA
2-oxoglutarate oxidoreductase subunit KorA.
  
 
 0.746
ndhI_2
NAD(P)H-quinone oxidoreductase subunit I, chloroplastic.
    
 0.741
atoD
Acetate CoA-transferase subunit alpha.
 
 
 0.721
gltB_1
Ferredoxin-dependent glutamate synthase 1.
   
 
 0.701
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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