Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
hsdMType I restriction enzyme EcoKI M protein. (516 aa)    
Predicted Functional Partners:
ACWI_17340
Type I restriction modification DNA specificity domain protein.
 
 
 0.992
hsdR_2
Type-1 restriction enzyme R protein; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
  
 0.970
ACWI_20500
Putative type-1 restriction enzyme specificity protein.
 
 0.938
ACWI_17360
Hypothetical protein.
 
     0.906
hsdR_3
Type I restriction enzyme R protein; Subunit R is required for both nuclease and ATPase activities, but not for modification.
  
 0.888
ACWI_20830
Hypothetical protein.
 
 
 0.883
ACWI_11350
EcoKI restriction-modification system protein HsdS.
  
 
 0.865
draG
ADP-ribosyl-[dinitrogen reductase] glycohydrolase.
      0.810
ACWI_32380
Hypothetical protein.
 
     0.742
aplIM
Modification methylase AplI.
     
 0.657
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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