Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
hsdR_2Type-1 restriction enzyme R protein; Subunit R is required for both nuclease and ATPase activities, but not for modification. (1051 aa)    
Predicted Functional Partners:
ACWI_17340
Type I restriction modification DNA specificity domain protein.
 
  
 0.971
hsdM
Type I restriction enzyme EcoKI M protein.
 
  
 0.970
ACWI_17360
Hypothetical protein.
 
   
 0.951
ACWI_20820
N-6 DNA methylase.
 
  
 0.917
ACWI_20480
Putative type I restriction enzymeP M protein.
 
  
 0.845
ACWI_32380
Hypothetical protein.
 
   
 0.795
ACWI_20830
Hypothetical protein.
 
  
 0.742
ACWI_31500
Hypothetical protein.
 
   
 0.702
ACWI_11350
EcoKI restriction-modification system protein HsdS.
  
  
 0.664
ACWI_20500
Putative type-1 restriction enzyme specificity protein.
  
  
 0.664
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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