Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACWI_17450 | ACWI_17490 | ACWI_17450 | ACWI_17490 | Hypothetical protein; Belongs to the UPF0342 family. | Hypothetical protein. | 0.705 |
ACWI_17450 | ACWI_17520 | ACWI_17450 | ACWI_17520 | Hypothetical protein; Belongs to the UPF0342 family. | Hypothetical protein; Belongs to the UPF0297 family. | 0.627 |
ACWI_17450 | fur | ACWI_17450 | ACWI_17470 | Hypothetical protein; Belongs to the UPF0342 family. | Ferric uptake regulation protein; Belongs to the Fur family. | 0.708 |
ACWI_17450 | nasF | ACWI_17450 | ACWI_01770 | Hypothetical protein; Belongs to the UPF0342 family. | uroporphyrinogen-III C-methyltransferase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | 0.400 |
ACWI_17450 | rnjA | ACWI_17450 | ACWI_17460 | Hypothetical protein; Belongs to the UPF0342 family. | Ribonuclease J 1; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay. | 0.708 |
ACWI_17450 | sfsA | ACWI_17450 | ACWI_17480 | Hypothetical protein; Belongs to the UPF0342 family. | Sugar fermentation stimulation protein A; Belongs to the SfsA family. | 0.600 |
ACWI_17450 | yhdN_3 | ACWI_17450 | ACWI_17510 | Hypothetical protein; Belongs to the UPF0342 family. | General stress protein 69. | 0.461 |
ACWI_17450 | yrrK | ACWI_17450 | ACWI_17500 | Hypothetical protein; Belongs to the UPF0342 family. | Putative holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. | 0.634 |
ACWI_17490 | ACWI_17450 | ACWI_17490 | ACWI_17450 | Hypothetical protein. | Hypothetical protein; Belongs to the UPF0342 family. | 0.705 |
ACWI_17490 | ACWI_17520 | ACWI_17490 | ACWI_17520 | Hypothetical protein. | Hypothetical protein; Belongs to the UPF0297 family. | 0.826 |
ACWI_17490 | fur | ACWI_17490 | ACWI_17470 | Hypothetical protein. | Ferric uptake regulation protein; Belongs to the Fur family. | 0.910 |
ACWI_17490 | rnjA | ACWI_17490 | ACWI_17460 | Hypothetical protein. | Ribonuclease J 1; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay. | 0.840 |
ACWI_17490 | sfsA | ACWI_17490 | ACWI_17480 | Hypothetical protein. | Sugar fermentation stimulation protein A; Belongs to the SfsA family. | 0.787 |
ACWI_17490 | yhdN_3 | ACWI_17490 | ACWI_17510 | Hypothetical protein. | General stress protein 69. | 0.703 |
ACWI_17490 | yrrK | ACWI_17490 | ACWI_17500 | Hypothetical protein. | Putative holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. | 0.938 |
ACWI_17520 | ACWI_17450 | ACWI_17520 | ACWI_17450 | Hypothetical protein; Belongs to the UPF0297 family. | Hypothetical protein; Belongs to the UPF0342 family. | 0.627 |
ACWI_17520 | ACWI_17490 | ACWI_17520 | ACWI_17490 | Hypothetical protein; Belongs to the UPF0297 family. | Hypothetical protein. | 0.826 |
ACWI_17520 | fur | ACWI_17520 | ACWI_17470 | Hypothetical protein; Belongs to the UPF0297 family. | Ferric uptake regulation protein; Belongs to the Fur family. | 0.599 |
ACWI_17520 | rnjA | ACWI_17520 | ACWI_17460 | Hypothetical protein; Belongs to the UPF0297 family. | Ribonuclease J 1; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay. | 0.628 |
ACWI_17520 | sfsA | ACWI_17520 | ACWI_17480 | Hypothetical protein; Belongs to the UPF0297 family. | Sugar fermentation stimulation protein A; Belongs to the SfsA family. | 0.433 |
page 1 of 4