Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACWI_19760Hypothetical protein. (67 aa)    
Predicted Functional Partners:
tagH
Teichoic acids export ATP-binding protein TagH.
  
    0.622
ACWI_15310
Hypothetical protein.
  
  
 0.589
tagG
Teichoic acid translocation permease protein TagG.
  
    0.585
ybhR_1
Inner membrane transport permease YbhR.
       0.501
ybhF_1
Putative ABC transporter ATP-binding protein YbhF.
       0.501
bmrR_1
Multidrug-efflux transporter 1 regulator.
  
    0.496
bmrU
Putative lipid kinase BmrU.
 
  
 0.458
ACWI_21880
Hypothetical protein.
 
    0.455
rsbW
Serine-protein kinase RsbW.
   
  
 0.448
ACWI_19980
Hypothetical protein.
 
    0.447
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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