STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pitA_2Low-affinity inorganic phosphate transporter 1. (360 aa)    
Predicted Functional Partners:
ACWI_19790
Putative pit accessory protein.
  
 0.990
ACWI_09030
Hypothetical protein.
 
  
 0.817
nasF
uroporphyrinogen-III C-methyltransferase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.
  
  
 0.655
pksJ
Polyketide synthase PksJ.
  
  
 0.615
gltB_1
Ferredoxin-dependent glutamate synthase 1.
  
  
 0.568
flgG_1
Flagellar basal-body rod protein FlgG.
    
   0.543
flgG_2
Flagellar basal-body rod protein FlgG.
    
   0.543
lysS
lysine--tRNA ligase; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
    0.504
pyrH
Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP.
   
    0.491
nifJ
Pyruvate-flavodoxin oxidoreductase.
     
 0.447
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.