STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACWI_20210Transcriptional repressor DicA. (375 aa)    
Predicted Functional Partners:
ACWI_20200
CAAX amino terminal protease self- immunity.
     
 0.781
ACWI_30510
Putative DNA-binding transcriptional regulator.
  
 
 0.634
cinA_3
Putative competence-damage inducible protein; Belongs to the CinA family.
    
 0.627
nadE
Glutamine-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
    
 0.558
nifJ
Pyruvate-flavodoxin oxidoreductase.
  
 
  0.537
ACWI_20220
Hypothetical protein.
  
 
 0.525
cheY_1
Chemotaxis protein CheY.
   
 0.409
vraR
Response regulator protein VraR.
   
 0.409
ACWI_04170
Hypothetical protein.
  
    0.401
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.