Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ACWI_20330Hypothetical protein. (160 aa)    
Predicted Functional Partners:
crtQ
4,4'-diaponeurosporenoate glycosyltransferase.
 
   
 0.930
ACWI_20310
Putative thiazole biosynthetic enzyme.
 
   
 0.883
crtD
Hydroxyneurosporene desaturase.
 
   
 0.869
ACWI_18330
Hypothetical protein.
  
     0.570
yeaP
Putative diguanylate cyclase YeaP.
       0.523
ACWI_20040
Polymer-forming cytoskeletal.
  
     0.502
crp_1
cAMP-activated global transcriptional regulator CRP.
       0.495
ACWI_20790
Hypothetical protein.
  
     0.488
uvsE
UV DNA damage endonuclease.
 
     0.480
asrC_2
Anaerobic sulfite reductase subunit C.
       0.470
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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