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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hsdR_3Type I restriction enzyme R protein; Subunit R is required for both nuclease and ATPase activities, but not for modification. (1009 aa)    
Predicted Functional Partners:
ACWI_20480
Putative type I restriction enzymeP M protein.
 
 0.997
ACWI_20500
Putative type-1 restriction enzyme specificity protein.
  
 0.984
hsdM
Type I restriction enzyme EcoKI M protein.
 
 0.957
ACWI_11340
Putative type I restriction enzymeP M protein.
  
 
 0.869
ACWI_20820
N-6 DNA methylase.
  
 
 0.869
paeR7IM
Modification methylase PaeR7I.
  
 
 0.866
ACWI_20490
GIY-YIG nuclease superfamily protein.
       0.782
ACWI_17340
Type I restriction modification DNA specificity domain protein.
 
  
 0.759
ACWI_05350
Hypothetical protein.
  
  
 0.651
ACWI_11350
EcoKI restriction-modification system protein HsdS.
  
  
 0.644
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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