Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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[Homology]
Score
hsdR_3Type I restriction enzyme R protein; Subunit R is required for both nuclease and ATPase activities, but not for modification. (1009 aa)    
Predicted Functional Partners:
ACWI_20480
Putative type I restriction enzymeP M protein.
  
 0.992
ACWI_20500
Putative type-1 restriction enzyme specificity protein.
  
 0.985
hsdM
Type I restriction enzyme EcoKI M protein.
  
 0.888
ACWI_20490
GIY-YIG nuclease superfamily protein.
     
 0.786
ACWI_17340
Type I restriction modification DNA specificity domain protein.
 
  
 0.762
ACWI_11350
EcoKI restriction-modification system protein HsdS.
  
  
 0.664
ACWI_11340
Putative type I restriction enzymeP M protein.
  
  
 0.662
ACWI_20820
N-6 DNA methylase.
  
  
 0.662
ACWI_11440
Hypothetical protein.
  
    0.653
paeR7IM
Modification methylase PaeR7I.
  
  
 0.651
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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