Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACWI_20830Hypothetical protein. (128 aa)    
Predicted Functional Partners:
ACWI_20820
N-6 DNA methylase.
 
 
 0.980
hsdM
Type I restriction enzyme EcoKI M protein.
 
 
 0.883
ACWI_11340
Putative type I restriction enzymeP M protein.
 
 
 0.870
ACWI_20480
Putative type I restriction enzymeP M protein.
  
 
 0.848
paeR7IM
Modification methylase PaeR7I.
  
 
 0.848
hsdR_2
Type-1 restriction enzyme R protein; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
  
 0.742
ACWI_20840
Hypothetical protein.
       0.701
hsdR_3
Type I restriction enzyme R protein; Subunit R is required for both nuclease and ATPase activities, but not for modification.
  
  
 0.647
hsdR_1
Type-1 restriction enzyme R protein.
 
 
 0.635
ACWI_11440
Hypothetical protein.
  
    0.630
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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