Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
smtBHTH-type transcriptional repressor SmtB. (99 aa)    
Predicted Functional Partners:
ACWI_21080
DGC domain protein.
       0.712
ziaA
Zinc-transporting ATPase.
  
  
 0.673
arsC_2
Glutaredoxin arsenate reductase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
 
  
 0.573
arsC_1
Glutaredoxin arsenate reductase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
 
  
 0.562
ACWI_21110
4Fe-4S binding domain protein.
     
 0.542
copB
Copper-exporting P-type ATPase B.
  
  
 0.538
gcvH_3
Glycine cleavage system H protein.
     
 0.532
ACWI_21130
DGC domain protein.
       0.515
ACWI_21140
DGC domain protein.
       0.515
cdr_4
Coenzyme A disulfide reductase; Belongs to the sulfur carrier protein TusA family.
  
  
 0.511
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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