Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACWI_21840 | mepA_4 | ACWI_21840 | ACWI_21860 | V4R domain protein. | Multidrug export protein MepA. | 0.408 |
ACWI_21840 | mhqR_2 | ACWI_21840 | ACWI_21850 | V4R domain protein. | HTH-type transcriptional regulator MhqR. | 0.443 |
ACWI_21840 | pleD_3 | ACWI_21840 | ACWI_21830 | V4R domain protein. | Response regulator PleD. | 0.646 |
cdr_4 | mgrA | ACWI_29960 | ACWI_28650 | Coenzyme A disulfide reductase; Belongs to the sulfur carrier protein TusA family. | HTH-type transcriptional regulator MgrA. | 0.434 |
cdr_4 | mhqR_2 | ACWI_29960 | ACWI_21850 | Coenzyme A disulfide reductase; Belongs to the sulfur carrier protein TusA family. | HTH-type transcriptional regulator MhqR. | 0.434 |
mepA_4 | ACWI_21840 | ACWI_21860 | ACWI_21840 | Multidrug export protein MepA. | V4R domain protein. | 0.408 |
mepA_4 | mhqR_2 | ACWI_21860 | ACWI_21850 | Multidrug export protein MepA. | HTH-type transcriptional regulator MhqR. | 0.764 |
mgrA | cdr_4 | ACWI_28650 | ACWI_29960 | HTH-type transcriptional regulator MgrA. | Coenzyme A disulfide reductase; Belongs to the sulfur carrier protein TusA family. | 0.434 |
mgrA | mhqR_2 | ACWI_28650 | ACWI_21850 | HTH-type transcriptional regulator MgrA. | HTH-type transcriptional regulator MhqR. | 0.418 |
mhqR_2 | ACWI_21840 | ACWI_21850 | ACWI_21840 | HTH-type transcriptional regulator MhqR. | V4R domain protein. | 0.443 |
mhqR_2 | cdr_4 | ACWI_21850 | ACWI_29960 | HTH-type transcriptional regulator MhqR. | Coenzyme A disulfide reductase; Belongs to the sulfur carrier protein TusA family. | 0.434 |
mhqR_2 | mepA_4 | ACWI_21850 | ACWI_21860 | HTH-type transcriptional regulator MhqR. | Multidrug export protein MepA. | 0.764 |
mhqR_2 | mgrA | ACWI_21850 | ACWI_28650 | HTH-type transcriptional regulator MhqR. | HTH-type transcriptional regulator MgrA. | 0.418 |
mhqR_2 | pleD_3 | ACWI_21850 | ACWI_21830 | HTH-type transcriptional regulator MhqR. | Response regulator PleD. | 0.411 |
pleD_3 | ACWI_21840 | ACWI_21830 | ACWI_21840 | Response regulator PleD. | V4R domain protein. | 0.646 |
pleD_3 | mhqR_2 | ACWI_21830 | ACWI_21850 | Response regulator PleD. | HTH-type transcriptional regulator MhqR. | 0.411 |