Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ACWI_21980Bacteriohemerythrin. (130 aa)    
Predicted Functional Partners:
norV
Anaerobic nitric oxide reductase flavorubredoxin.
  
  
 0.552
ACWI_14590
Flavodoxin.
  
  
 0.552
fprA
Nitric oxide reductase.
  
  
 0.552
ACWI_23890
Flavodoxin.
  
  
 0.552
cheC
CheY-P phosphatase CheC.
  
 
   0.501
fliM
Flagellar motor switch protein FliM.
    
   0.491
tap_16
Methyl-accepting chemotaxis protein IV.
  
    0.431
fliN
Flagellar motor switch protein FliN.
    
   0.426
cheW_1
Chemotaxis protein CheW.
  
    0.425
nifJ
Pyruvate-flavodoxin oxidoreductase.
    
 
 0.406
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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