Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACWI_04070 | cdaR_1 | ACWI_04070 | ACWI_15460 | Carbohydrate diacid transcriptional activator CdaR. | Carbohydrate diacid regulator. | 0.760 |
ACWI_04070 | pucR_5 | ACWI_04070 | ACWI_22130 | Carbohydrate diacid transcriptional activator CdaR. | Purine catabolism regulatory protein. | 0.614 |
ACWI_04070 | pucR_6 | ACWI_04070 | ACWI_32620 | Carbohydrate diacid transcriptional activator CdaR. | Purine catabolism regulatory protein. | 0.768 |
ACWI_22140 | pucR_5 | ACWI_22140 | ACWI_22130 | Hypothetical protein. | Purine catabolism regulatory protein. | 0.491 |
ACWI_34780 | pucR_5 | ACWI_34780 | ACWI_22130 | Carbohydrate diacid transcriptional activator CdaR. | Purine catabolism regulatory protein. | 0.657 |
ACWI_34780 | pucR_6 | ACWI_34780 | ACWI_32620 | Carbohydrate diacid transcriptional activator CdaR. | Purine catabolism regulatory protein. | 0.762 |
cdaR_1 | ACWI_04070 | ACWI_15460 | ACWI_04070 | Carbohydrate diacid regulator. | Carbohydrate diacid transcriptional activator CdaR. | 0.760 |
cdaR_1 | pucR_5 | ACWI_15460 | ACWI_22130 | Carbohydrate diacid regulator. | Purine catabolism regulatory protein. | 0.697 |
cdaR_2 | pucR_5 | ACWI_17890 | ACWI_22130 | Carbohydrate diacid regulator. | Purine catabolism regulatory protein. | 0.743 |
cdaR_3 | pucR_5 | ACWI_32740 | ACWI_22130 | Carbohydrate diacid regulator. | Purine catabolism regulatory protein. | 0.616 |
cdaR_4 | pucR_5 | ACWI_32750 | ACWI_22130 | Carbohydrate diacid regulator. | Purine catabolism regulatory protein. | 0.671 |
davT | pucR_5 | ACWI_22110 | ACWI_22130 | 5-aminovalerate aminotransferase DavT; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Purine catabolism regulatory protein. | 0.752 |
pucR_4 | pucR_5 | ACWI_19340 | ACWI_22130 | Purine catabolism regulatory protein. | Purine catabolism regulatory protein. | 0.734 |
pucR_5 | ACWI_04070 | ACWI_22130 | ACWI_04070 | Purine catabolism regulatory protein. | Carbohydrate diacid transcriptional activator CdaR. | 0.614 |
pucR_5 | ACWI_22140 | ACWI_22130 | ACWI_22140 | Purine catabolism regulatory protein. | Hypothetical protein. | 0.491 |
pucR_5 | ACWI_34780 | ACWI_22130 | ACWI_34780 | Purine catabolism regulatory protein. | Carbohydrate diacid transcriptional activator CdaR. | 0.657 |
pucR_5 | cdaR_1 | ACWI_22130 | ACWI_15460 | Purine catabolism regulatory protein. | Carbohydrate diacid regulator. | 0.697 |
pucR_5 | cdaR_2 | ACWI_22130 | ACWI_17890 | Purine catabolism regulatory protein. | Carbohydrate diacid regulator. | 0.743 |
pucR_5 | cdaR_3 | ACWI_22130 | ACWI_32740 | Purine catabolism regulatory protein. | Carbohydrate diacid regulator. | 0.616 |
pucR_5 | cdaR_4 | ACWI_22130 | ACWI_32750 | Purine catabolism regulatory protein. | Carbohydrate diacid regulator. | 0.671 |
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