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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ssuC_2Putative aliphatic sulfonates transport permease protein SsuC. (261 aa)    
Predicted Functional Partners:
tauA
Taurine-binding periplasmic protein precursor.
 
 0.999
tauB_2
Taurine import ATP-binding protein TauB.
 
 0.985
tauB_1
Taurine import ATP-binding protein TauB.
 
 0.948
cmpD
Bicarbonate transport ATP-binding protein CmpD.
 
 0.946
cysA_1
Sulfate/thiosulfate import ATP-binding protein CysA.
 
 0.933
ssuA
Putative aliphatic sulfonates-binding protein precursor.
 
 
 0.896
ACWI_06620
Putative thiamine biosynthesis protein.
 
 
 0.844
ACWI_25910
NMT1/THI5 like protein.
  
 
 0.796
cmpB
Bicarbonate transport system permease protein CmpB.
  
     0.768
ACWI_22200
Putative inner membrane protein.
 
     0.754
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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