Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
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[Homology]
Score
ssuC_3Putative aliphatic sulfonates transport permease protein SsuC. (260 aa)    
Predicted Functional Partners:
ssuA
Putative aliphatic sulfonates-binding protein precursor.
 
 
 0.990
cmpD
Bicarbonate transport ATP-binding protein CmpD.
 
 0.989
tauB_2
Taurine import ATP-binding protein TauB.
 
 0.957
tauB_1
Taurine import ATP-binding protein TauB.
 
 0.947
cysA_1
Sulfate/thiosulfate import ATP-binding protein CysA.
 
 0.936
tauA
Taurine-binding periplasmic protein precursor.
 
  
 0.881
ACWI_06620
Putative thiamine biosynthesis protein.
 
 
 0.875
ACWI_25910
NMT1/THI5 like protein.
 
 
 0.864
purT
Phosphoribosylglycinamide formyltransferase 2.
 
     0.837
pspE_3
Thiosulfate sulfurtransferase PspE precursor.
  
   
 0.701
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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