Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACWI_23180 | ACWI_23200 | ACWI_23180 | ACWI_23200 | Hypothetical protein. | EamA-like transporter family protein. | 0.583 |
ACWI_23180 | ACWI_23210 | ACWI_23180 | ACWI_23210 | Hypothetical protein. | Hypothetical protein. | 0.572 |
ACWI_23180 | arnC_2 | ACWI_23180 | ACWI_23220 | Hypothetical protein. | Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase. | 0.482 |
ACWI_23180 | arnE_2 | ACWI_23180 | ACWI_23190 | Hypothetical protein. | 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE. | 0.591 |
ACWI_23200 | ACWI_23180 | ACWI_23200 | ACWI_23180 | EamA-like transporter family protein. | Hypothetical protein. | 0.583 |
ACWI_23200 | ACWI_23210 | ACWI_23200 | ACWI_23210 | EamA-like transporter family protein. | Hypothetical protein. | 0.773 |
ACWI_23200 | ACWI_23230 | ACWI_23200 | ACWI_23230 | EamA-like transporter family protein. | Undecaprenyl-phosphate mannosyltransferase. | 0.452 |
ACWI_23200 | ACWI_23240 | ACWI_23200 | ACWI_23240 | EamA-like transporter family protein. | Hypothetical protein. | 0.428 |
ACWI_23200 | arnC_2 | ACWI_23200 | ACWI_23220 | EamA-like transporter family protein. | Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase. | 0.583 |
ACWI_23200 | arnE_2 | ACWI_23200 | ACWI_23190 | EamA-like transporter family protein. | 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE. | 0.931 |
ACWI_23200 | pksJ | ACWI_23200 | ACWI_26840 | EamA-like transporter family protein. | Polyketide synthase PksJ. | 0.408 |
ACWI_23210 | ACWI_23180 | ACWI_23210 | ACWI_23180 | Hypothetical protein. | Hypothetical protein. | 0.572 |
ACWI_23210 | ACWI_23200 | ACWI_23210 | ACWI_23200 | Hypothetical protein. | EamA-like transporter family protein. | 0.773 |
ACWI_23210 | ACWI_23230 | ACWI_23210 | ACWI_23230 | Hypothetical protein. | Undecaprenyl-phosphate mannosyltransferase. | 0.401 |
ACWI_23210 | arnC_2 | ACWI_23210 | ACWI_23220 | Hypothetical protein. | Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase. | 0.545 |
ACWI_23210 | arnE_2 | ACWI_23210 | ACWI_23190 | Hypothetical protein. | 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE. | 0.773 |
ACWI_23230 | ACWI_23200 | ACWI_23230 | ACWI_23200 | Undecaprenyl-phosphate mannosyltransferase. | EamA-like transporter family protein. | 0.452 |
ACWI_23230 | ACWI_23210 | ACWI_23230 | ACWI_23210 | Undecaprenyl-phosphate mannosyltransferase. | Hypothetical protein. | 0.401 |
ACWI_23230 | ACWI_23240 | ACWI_23230 | ACWI_23240 | Undecaprenyl-phosphate mannosyltransferase. | Hypothetical protein. | 0.778 |
ACWI_23230 | arnC_2 | ACWI_23230 | ACWI_23220 | Undecaprenyl-phosphate mannosyltransferase. | Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase. | 0.669 |
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