STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACWI_23300N-acetylmuramoyl-l-alanine amidase I. (941 aa)    
Predicted Functional Partners:
ACWI_10930
Hypothetical protein.
    
   0.750
mepM_3
Murein DD-endopeptidase MepM.
 
  
 
0.711
dacB
D-alanyl-D-alanine carboxypeptidase DacB precursor; Belongs to the peptidase S11 family.
   
 
 0.697
epsE_1
Putative glycosyltransferase EpsE.
 
   
 0.675
spoVD
Stage V sporulation protein D.
  
 
 0.673
lytC
N-acetylmuramoyl-L-alanine amidase LytC precursor.
  
  
  0.653
ACWI_07670
Clostridial hydrophobic W.
  
  0.625
ACWI_25720
Hypothetical protein.
 
  
  0.625
pbpF
Penicillin-binding protein 1F.
    
 0.609
ACWI_30730
Hypothetical protein.
    
 0.609
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.