Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
arsD_3Arsenical resistance operon trans-acting repressor ArsD. (143 aa)    
Predicted Functional Partners:
nifJ
Pyruvate-flavodoxin oxidoreductase.
  
 
 0.986
korA
2-oxoglutarate oxidoreductase subunit KorA.
  
 
 0.909
arsA_3
Arsenical pump-driving ATPase.
 
   
 0.806
padG
NADH-dependent phenylglyoxylate dehydrogenase subunit alpha.
  
 
 0.677
korB
2-oxoglutarate oxidoreductase subunit KorB.
  
 
 0.669
porB
Pyruvate synthase subunit PorB.
  
 
 0.669
sfrB_1
NADPH-Fe(3+) oxidoreductase subunit beta.
  
 
 0.660
sfrB_2
NADPH-Fe(3+) oxidoreductase subunit beta.
  
 
 0.660
arsA_1
Arsenical pump-driving ATPase.
 
   
 0.648
ACWI_20690
Indolepyruvate oxidoreductase subunit beta.
  
 
 0.628
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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