STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
comCType 4 prepilin-like proteins leader peptide-processing enzyme. (254 aa)    
Predicted Functional Partners:
epsF_2
Type II secretion system protein F.
 
  
 0.959
epsE_2
Type II secretion system protein E.
 
 
 0.884
gspE
Putative type II secretion system protein E.
 
 
 0.883
epsF_1
Type II secretion system protein F.
 
  
 0.881
epsG
Type II secretion system protein G precursor.
 
  
 0.859
pilT
Twitching mobility protein.
 
   
 0.809
ACWI_27980
ComEC family competence protein.
 
  
 0.794
ACWI_23720
Hypothetical protein; Prokaryotic N-terminal methylation motif.
 
  
 0.784
ACWI_23710
Hypothetical protein.
 
  
 0.771
ACWI_23690
Putative major pilin subunit.
 
  
 0.736
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.