STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ppcAPhosphoenolpyruvate carboxylase. (536 aa)    
Predicted Functional Partners:
purK
N5-carboxyaminoimidazole ribonucleotide synthase; Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR).
       0.780
pyk
Pyruvate kinase; Belongs to the pyruvate kinase family.
     
 0.752
purE_1
N5-carboxyaminoimidazole ribonucleotide mutase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).
 
     0.636
ACWI_23820
Hypothetical protein.
 
     0.620
gltA
Citrate synthase; Belongs to the citrate synthase family.
     
 0.574
purT
Phosphoribosylglycinamide formyltransferase 2.
     
 0.573
dmsB
Anaerobic dimethyl sulfoxide reductase chain B.
  
  
  0.520
ttdA
L(+)-tartrate dehydratase subunit alpha.
     
 0.486
pgk/tpi
Bifunctional PGK/TIM; Belongs to the phosphoglycerate kinase family.
  
  
  0.445
fumA
Fumarate hydratase class I, aerobic.
     
 0.430
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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