STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fdhFFormate dehydrogenase H. (897 aa)    
Predicted Functional Partners:
hndC_2
NADP-reducing hydrogenase subunit HndC.
 0.997
hndC_1
NADP-reducing hydrogenase subunit HndC.
 0.992
nasB
Assimilatory nitrate reductase electron transfer subunit.
 
 
 0.970
hndD
NADP-reducing hydrogenase subunit HndC.
 
 
0.958
hndA_4
NADP-reducing hydrogenase subunit HndA.
 0.954
cdr_2
Coenzyme A disulfide reductase.
   
  0.952
ACWI_35610
Iron hydrogenase 1.
   
 0.949
ngr
Nigerythrin.
  
 0.941
rsxB_2
Electron transport complex subunit RsxB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
  
 0.939
fdhD_3
Protein FdhD; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.
 
 
 0.923
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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