STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cinA_2Putative competence-damage inducible protein. (535 aa)    
Predicted Functional Partners:
fdhF
Formate dehydrogenase H.
    
 0.944
sfrB_1
NADPH-Fe(3+) oxidoreductase subunit beta.
  
 
 0.933
cooS1_2
Carbon monoxide dehydrogenase 1.
  
 
  0.922
padI
NADH-dependent phenylglyoxylate dehydrogenase subunit beta.
    
 0.911
cooS1_1
Carbon monoxide dehydrogenase 1.
   
 
  0.905
ACWI_17860
FmdE, molybdenum formylmethanofuran dehydrogenase operon.
  
 
  0.902
ACWI_31940
FmdE, molybdenum formylmethanofuran dehydrogenase operon.
  
 
  0.902
fdhD_3
Protein FdhD; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.
     
 0.694
mocA_1
Molybdenum cofactor cytidylyltransferase.
 
   
 0.631
ACWI_21050
Hypothetical protein.
 
     0.599
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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