Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACWI_14730 | barA_1 | ACWI_14730 | ACWI_15680 | Hypothetical protein. | Signal transduction histidine-protein kinase BarA. | 0.942 |
ACWI_14730 | barA_2 | ACWI_14730 | ACWI_16170 | Hypothetical protein. | Signal transduction histidine-protein kinase BarA. | 0.957 |
ACWI_14730 | btrV | ACWI_14730 | ACWI_25430 | Hypothetical protein. | Putative anti-sigma factor antagonist BtrV; Belongs to the anti-sigma-factor antagonist family. | 0.991 |
ACWI_14730 | fliN | ACWI_14730 | ACWI_26320 | Hypothetical protein. | Flagellar motor switch protein FliN. | 0.538 |
ACWI_14730 | luxQ_1 | ACWI_14730 | ACWI_30060 | Hypothetical protein. | Autoinducer 2 sensor kinase/phosphatase LuxQ. | 0.603 |
ACWI_14730 | luxQ_2 | ACWI_14730 | ACWI_30830 | Hypothetical protein. | Autoinducer 2 sensor kinase/phosphatase LuxQ. | 0.606 |
ACWI_14730 | rsbP | ACWI_14730 | ACWI_27690 | Hypothetical protein. | Phosphoserine phosphatase RsbP. | 0.960 |
ACWI_14730 | rsbU | ACWI_14730 | ACWI_14700 | Hypothetical protein. | Phosphoserine phosphatase RsbU. | 0.998 |
barA_1 | ACWI_14730 | ACWI_15680 | ACWI_14730 | Signal transduction histidine-protein kinase BarA. | Hypothetical protein. | 0.942 |
barA_1 | barA_2 | ACWI_15680 | ACWI_16170 | Signal transduction histidine-protein kinase BarA. | Signal transduction histidine-protein kinase BarA. | 0.996 |
barA_1 | btrV | ACWI_15680 | ACWI_25430 | Signal transduction histidine-protein kinase BarA. | Putative anti-sigma factor antagonist BtrV; Belongs to the anti-sigma-factor antagonist family. | 0.975 |
barA_1 | fliN | ACWI_15680 | ACWI_26320 | Signal transduction histidine-protein kinase BarA. | Flagellar motor switch protein FliN. | 0.995 |
barA_1 | luxQ_1 | ACWI_15680 | ACWI_30060 | Signal transduction histidine-protein kinase BarA. | Autoinducer 2 sensor kinase/phosphatase LuxQ. | 0.995 |
barA_1 | luxQ_2 | ACWI_15680 | ACWI_30830 | Signal transduction histidine-protein kinase BarA. | Autoinducer 2 sensor kinase/phosphatase LuxQ. | 0.995 |
barA_1 | rsbP | ACWI_15680 | ACWI_27690 | Signal transduction histidine-protein kinase BarA. | Phosphoserine phosphatase RsbP. | 0.982 |
barA_1 | rsbT | ACWI_15680 | ACWI_06890 | Signal transduction histidine-protein kinase BarA. | Serine/threonine-protein kinase RsbT. | 0.934 |
barA_1 | rsbU | ACWI_15680 | ACWI_14700 | Signal transduction histidine-protein kinase BarA. | Phosphoserine phosphatase RsbU. | 0.971 |
barA_1 | rsbW | ACWI_15680 | ACWI_25810 | Signal transduction histidine-protein kinase BarA. | Serine-protein kinase RsbW. | 0.934 |
barA_2 | ACWI_14730 | ACWI_16170 | ACWI_14730 | Signal transduction histidine-protein kinase BarA. | Hypothetical protein. | 0.957 |
barA_2 | barA_1 | ACWI_16170 | ACWI_15680 | Signal transduction histidine-protein kinase BarA. | Signal transduction histidine-protein kinase BarA. | 0.996 |
page 1 of 6