STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pduA_1Propanediol utilization protein PduA. (91 aa)    
Predicted Functional Partners:
ccmL
Carbon dioxide concentrating mechanism protein CcmL.
 
 
 
 0.989
sucD
Succinate-semialdehyde dehydrogenase (acetylating).
 
  
 0.902
ACWI_25710
BMC domain protein.
 
   
 0.885
hscA
Chaperone protein HscA.
 
  
 0.876
pduU
Propanediol utilization protein PduU.
 
  
 0.858
pduB
Propanediol utilization protein PduB.
 
  
 0.849
eutL
Ethanolamine utilization protein EutL.
 
  
 0.835
pduC
Propanediol dehydratase large subunit.
  
  
 0.782
pduV_2
Propanediol utilization protein PduV; Belongs to the EutP/PduV family.
 
  
 0.764
pduV_1
Propanediol utilization protein PduV; Belongs to the EutP/PduV family.
 
  
 0.762
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.